Skip to main content

Advertisement

Table 5 Geologic time table of animal, plants, amoebae and fungi's contribution to the proteomics of M. leucophaeata

From: Proteomic study of the brackish water mussel Mytilopsis leucophaeata

Component with proteins Time of generation (MYA) Contribution (%) Sum (%)
Amoeba (Dictyosteliidae): actin 18; probable malate dehydrogenase. 1070 (Wegener Parfrey et al. 2011) 1.8 1.8
Encephalitozoon cuniculi (protozoon parasite): ubiquitin. 1000 (Hedges 2002) 0.9 2.7
Starlet sea anemone (polyp): ribosomal subunit 40S-S3a. 655 (Wegener Parfrey et al. 2011) 0.9 3.6
Fission yeast (S. pombe): ribosomal subunit 60S-L7c; ADP-ribosylation factor 1 (Arf1). 600 (Wegener Parfrey et al. 2011) 1.8 5.4
Lancelet & worms: ribosomal subunit 40S-SA; cytoplasmic actin; actin 3; gelsolin-like protein 1; guanine nucleotide-binding protein; tubulin β-2 chain; ATP synthase, subunit α; phosphoenolpyruvate carboxykinase. 551 to 505 (Bagley 2013) 7.1 12.5
Bivalves: ribosomal subunit 40S-SA; ribosomal subunit 40S-S18; ribosomal subunit 40S-S19; guanine nucleotide-binding protein, subunit β; guanine nucleotide-binding protein G(o), subunit α; actin; myosin essential adductor muscle light chain; paramyosin; adductor muscle actin (precursor); myosin heavy chain. approximately 510 (Kansas Geological Survey 2008) 8.9 21.4
Hydrozoa ( Hydra vulgaris; Podocoryne carnea): actin, non-muscle; actin 3. approximately 505 (Cartwright et al. 2007) 1.8 23.2
Gastropoda: Lymnaea stagnalis: guanine nucleotide-binding protein G(q), subunit α; 2005) Biomphalaria glabrata; guanine nucleotide-binding protein, subunit β-2-like, Rack 1; Aplysia californica: 78 kDa glucose-regulated protein; Haliotis diversicolor: tropomyosin; Patella granatina: histone H2B, gonadal. 500 (Kansas Geological Survey 2005) 4.5 27.7
Cephalopoda: ribosomal subunit 40S-S26; enolase; myosin catalytic light chain LC-1; histone H2A. 500 to 440 ([PPT] Life and Geologic Time) 3.6 31.3
Echinodermata (Strongylocentrotus purpuratus): actin, cytoskeletal 1A; actin, muscle (precursor); major vault protein. approximately 450 (Smith 1984) 2.7 34.0
Insects (Arthropoda, Hexopoda): ribosomal subunit 40S-S4; ribosomal subunit 60S-L5; ribosomal subunit 60S-L8; ribosomal subunit 60S-L17; actin; V-type proton ATPase catalytic subunit A. 400 (Grimaldi and Engel 2005) 5.4 39.4
Fruit fly (Drosophila melanogaster): ribosomal subunit 40S-S14; heat-shock 70 kDa protein cognate 3; Ca2+ transporting ATPase; spectrin β-chain; α-actinin, sarcomeric; actin, larval muscle; histone H3; 14-3-3 protein ε. 321 (Wegener Parfrey et al. 2011) 7.1 46.5
Fungi (Saccharomyces cerevisiae): ribosomal subunit 60S-L16a. 309 (Wegener Parfrey et al. 2011) 0.9 47.4
Amphibians (Xenopus tropicalis, Xenopus laevis): ribosomal subunit 40S-S13; ribosomal subunit 60S-L4b; actin, cytoplasmic 2; malate dehydrogenase, cytoplasmic; succinate dehydrogenase. 250 (Zhang et al. 2005a, b) 4.5 51.9
(Anthozoa, stony corals): histone H4. 240 (Waggoner 2000) 0.9 52.8
Elasmobranchii (rays): Na+/K+-ATPase; Ras-related protein O-Rab1. 190 (prehistoric sharks - megalodon, fossil teeth, shark attacks) (Pre-Historic Sharks) 1.8 54.6
Amphibians (salamander): T-complex protein 1, subunit α. 139 (Zhang et al. 2005a) 0.9 55.5
Teleosts (channel catfish): ribosomal subunit 40S-S6; ribosomal subunit 60S-L7a. 160 to 110 (Volff 2005) 1.8 57.3
Plantae (cruciferae, thale cress): proteasome subunit α type-5-A; ADP/ATP carrier protein 3. 127 (Wegener Parfrey et al. 2011) 1.8 59.1
Teleosts (Takifugu rubripes): ribosomal subunit 40S-S24. 80 to 60 (Volff 2005) 0.9 60.0
Goldfish: proteasome subunit α type-2. 49 to 46 (Wang et al. 2007) 0.9 60.9
Birds (chicken, Galliformes, Phasianidae): sarcoplasmic/endoplasmic reticulum ATPase 3; heat-shock 70 kDa protein; plastin-1; spectrin α chain, non-erythrocytic 1; heat-shock cognate protein HSP90-β; myosin-11; histone H2A.V; proteasome subunit α type-7; ATP synthase, subunit β precursor. 58 to 37 (Mlikovský 1989) 8.0 68.9
Decapoda (brine shrimp): actin, clone 205; elongation factor 1α. 40 (Baxeranis et al. 2006) 1.8 70.7
Mammals (house mouse): ribosomal subunit 40S-S16; AP-1 complex, subunit β-1; radixin; tubulin α-3 chain. 6.5 (Veyrunes et al. 2006) 3.6 74.3
Rabbit: endoplasmin. 6.5 (Branco et al. 2000) 0.9 75.2
Teleosts (Japanese medaka); actin, cytoplasmic 1 (β-actin). 6.0 to 5.4 (Takehana et al. 2003) 0.9 76.1
Rattus norvegicus: ribosomal subunit 40S-S27-like; ribosomal subunit 60S-L4; ribosomal subunit 60S-L5; ribosomal subunit 60S-L26; clathrin heavy chain 1; glyceraldehyde-3-phosphate dehydrogenase 2. 6 to 3.5 (Furano and Usdin 1995; Verneau et al. 1998) 5.4 81.5
Cow: ribosomal subunit 40S-S2; ribosomal subunit 40S-S7; ribosomal subunit 40S-S9; ribosomal subunit 40S-S17; peptidyl-prolyl cis-trans isomerase C (cyclophilin C). 1.4 (Mac Hugh et al. 1997) 4.5 86.0
Chimpanzee: Ras-related protein Rap-1b; tubulin-1A chain; eucaryotic initiation factor 4A-I. 0.9 to 0.86 (Won and Hey 2005) 2.7 88.7
Homo sapiens: ribosomal subunit 40S-S3; ribosomal subunit 40S-S5; ribosomal subunit 60S-L23a; α-amylase; glycogen phosphorylase; dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A; myosin-9. 0.2 to 015 (Reid and Hetherington 2010) 6.3 95.0
Dog (Canis lupus familiaris): ribosomal subunit 60S-L12. 0.032 (Germonpré et al. 2009) 0.9 95.9
Goat (Capra hircus): ribosomal subunit 40S-S18. 0.006 to 0.007 (www.ansi.okstate.edu/breeds/goats/) 0.9 96.8
Fungi (Puccinia graminis: stemrust): actin. 0.0033 (Kislev 1982) 0.9 97.7
Wild boar: transitional endoplasmic reticulum ATPase (TERA); trypsin. 0.005 to 0 (Hardjasasmita 1987) 1.8 99.5
  1. Time is expressed in MYA (million years ago), and contribution in percent of total (112 items), excluding bacterial contamination and vegetable contribution from wetlands.