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Table 3 Features of the mitogenomes of three rhombosoleid fishes

From: Complete mitochondrial genome sequences of three rhombosoleid fishes and comparative analyses with other flatfishes (Pleuronectiformes)

 

Peltorhamphus novaezeelandiae

Colistium nudipinnis

Pelotretis flavilatus

  

Start

Stop

  

Start

Stop

  

Start

Stop

 

Gene

Position

anticodon

I-R*

Position

anticodon

I-R

Position

anticodon

I-R

tRNA Phe

1 to 68

GAA

0

1 to 68

GAA

0

1 to 69

GAA

0

12S rRNA

69 to 1,010

 

0

69 to 1,010

 

0

70 to 1,016

 

0

tRNA Val

1,011 to 1,081

TAC

0

1,011 to 1,081

TAC

0

1,017 to 1,087

TAC

0

16S rRNA

1,082 to 2,795

 

1

1,082 to 2,792

 

1

1,088 to 2,816

 

0

tRNA Leu( UUA )

2,797 to 2,870

TAA

0

2,794 to 2,867

TAA

0

2,817 to 2,890

TAA

28

ND1

2,871 to 3,845

ATG

TAA

5

2,868 to 3,842

ATG

TAA

5

2,919 to 3,866

ATG

TAA

6

tRNA Ile

3,851 to 3,920

GAT

−1

3,848 to 3,917

GAT

−1

3,873 to 3,942

GAT

−1

tRNA Gln

3,920 to 3,990

TTG

−1

3,917 to 3,987

TTG

−1

3,942 to 4,013

TTG

−1

tRNA Met

3,990 to 4,059

CAT

0

3,987 to 4,055

CAT

1

4,013 to 4,081

CAT

1

ND2

4,060 to 5,109

ATG

TAA

−1

4,057 to 5,106

ATG

TAA

−1

4,083 to 5,132

ATG

TAA

−1

tRNA Trp

5,109 to 5,179

TCA

1

5,106 to 5,176

TCA

1

5,132 to 5,202

TCA

1

tRNA Ala

5,181 to 5,249

TGC

1

5,178 to 5,246

TGC

1

5,204 to 5,272

TGC

1

tRNA Asn

5,251 to 5323

GTT

0

5,248 to 5,320

GTT

0

5,274 to 5,346

GTT

0

OL

5,324 to 5,361

 

−4

5,321 to 5,364

 

−4

5,347 to 5,390

 

−4

tRNA Cys

5,358 to 5,417

GCA

−1

5,361 to 5,420

GCA

−1

5,387 to 5,446

GCA

−1

tRNA Tyr

5,417 to 5,486

GTA

1

5,420 to 5,489

GTA

1

5,446 to 5,515

GTA

1

COI

5,488 to 7,038

GTG

TAA

0

5,491 to 7,041

GTG

TAA

0

5,517 to 7,067

GTG

TAA

0

tRNA Ser (UCA)

7,039 to 7,109

TGA

3

7,042 to 7,112

TGA

3

7,068 to 7,138

TGA

3

tRNA Asp

7,113 to 7,181

GTC

6

7,116 to 7,184

GTC

6

7,142 to 7,210

GTC

18

COII

7,188 to 7,880

ATG

TAA

7

7,191 to 7,881

ATG

T-

0

7,229 to 7,919

ATG

T-

0

tRNA Lys

7,888 to 7,961

TTT

1

7,882 to 7,955

TTT

1

7,920 to 7,993

TTT

1

ATP8

7,963 to 8,130

ATG

TAA

−10

7,957 to 8,124

ATG

TAA

−10

7,995 to 8,162

ATG

TAA

−10

ATP6

8,121 to 8,804

ATG

TAA

−1

8,115 to 8,798

ATG

TAA

−1

8,153 to 8,836

ATG

TAA

−1

COIII

8,804 to 9,589

ATG

TAA

−1

8,798 to 9,583

ATG

TAA

−1

8,836 to 9,621

ATG

TAA

−1

tRNA Gly

9,589 to 9,660

TCC

−3

9,583 to 9,654

TCC

−3

9,621 to 9,691

TCC

−3

ND3

9,658 to 10,011

ATA

TAG

−2

9,652 to 10,005

ATA

TAG

−2

9,689 to 10,042

ATA

TAG

−2

tRNA Arg

10,010 to 10,078

TCG

0

10,004 to 10,072

TCG

0

10,041 to 10,109

TCG

0

ND4L

10,079 to 10,375

ATG

TAA

−7

10,073 to 10,369

ATG

TAA

−7

10,110 to 10,406

ATG

TAA

−7

ND4

10,369 to 11,749

ATG

T-

0

10,363 to 11,743

ATG

T-

0

10,400 to 11,780

ATG

T-

0

tRNA His

11,750 to 11,818

GTG

0

11,744 to 11,812

GTG

0

11,781 to 11,849

GTG

0

tRNA Ser (AGC)

11,819 to 11,885

GCT

4

11,813 to 11,879

GCT

4

11,850 to 11,916

GCT

4

tRNA Leu (CUA)

11,890 to 11,962

TAG

0

11,884 to 11,956

TAG

0

11,921 to 11,993

TAG

1

ND5

11,963 to 13,801

ATG

TAA

−4

11,957 to 13,795

ATG

TAG

−4

11,995 to 13,845

ATG

TAA

−4

ND6

13,798 to 14,319

ATG

TAG

0

13,792 to 14,313

ATG

TAG

0

13,842 to 14,363

ATG

TAG

1

tRNA Glu

14,320 to 14,388

TTC

4

14,314 to 14,382

TTC

4

14,365 to 14,438

TTC

−2

Cytb

14,393 to 15,533

ATG

T-

0

14,387 to 15,527

ATG

T-

0

14,437 to 15,577

ATG

T-

0

tRNA Thr

15,534 to 15,607

TGT

−1

15,528 to 15,599

TGT

−1

15,578 to 15,649

TGT

−1

tRNA Pro

15,607 to 15,677

TGG

0

15,599 to 15,669

TGG

0

15,649 to 15,719

TGG

0

D-loop

15,678 to 16,889

  

15,670 to 16,588

  

15,720 to 16,937

  
  1. I-R*, intergenic region; non-coding bases between the feature on the same line and the line below, with a negative number indicating an overlap.