Phylogenetic and taxonomic status of the coral Goniopora stokesi and related species (Scleractinia: Poritidae) in Japan based on molecular and morphological data

Kitano, Yuko F; Obuchi, Masami; Uyeno, Daisuke; Miyazaki, Katsumi; Fukami, Hironobu

doi:10.1186/1810-522X-52-25

Zoological Studies

Table 1 List of identification of species of Goniopora based on the literature and the accession numbers of DNA sequences

From: Phylogenetic and taxonomic status of the coral Goniopora stokesi and related species (Scleractinia: Poritidae) in Japan based on molecular and morphological data

Species	Morphological features for ‘cf’	Sample number	Location	Accession number		Measurement	Free-living	Development of epitheca
				rDNA	mtDNA
G. columna		IS3	Ishigaki	AB748660
G. columna		IS4	Ishigaki	AB748661	AB748754
G. columna		IR29	Iriomote		AB764138
S. stokesi		NK1	Nakijin	AB748662	AB748755	Yes	Yes	Yes
G. stokesi		OU12	Oura Bay	AB748663	AB748756		Yes	Yes
G. stokesi		OU14	Oura Bay	AB748664			Yes	Yes
G. stokesi		OU17	Oura Bay	AB748665	AB748757		Yes	Yes
G. stokesi		OU19	Oura Bay	AB748666	AB748758		Yes	Yes
G. stokesi		OU20	Oura Bay	AB748667	AB748759	Yes	Yes	Yes
G. stokesi		OU22	Oura Bay	AB748668			Yes	Yes
G. stokesi		OU24	Oura Bay	AB748669	AB748760		Yes	Yes
G. stokesi		OU26	Oura Bay	AB748670			Yes	Yes
G. stokesi		OU41	Oura Bay	AB748671			Yes	Yes
G. stokesi		OU43	Oura Bay	AB748672	AB748761	Yes	Yes	Yes
G. stokesi		IR27	Iriomote	AB748673-4	AB748762	Yes	Yes
G. stokesi		IR65	Iriomote	AB748675	AB748763	Yes	Yes	Yes
G. cf. stokesi	Shallow calices, colony attached to substrate	MO82	Miyazaki	AB748686	AB748768	Yes
G. lobata		KS28	Kushimoto	AB748741	AB748788	Yes
G. lobata		KS57	Kushimoto	AB748742
G. lobata		SR44	Shirahama	AB748743
G. lobata		YO1	Yokonami	AB748744	AB748789	Yes
G. lobata		YO10	Yokonami	AB748745-6
G. lobata		MO36	Miyazaki	AB748747-8	AB748790	Yes
G. lobata		AM48	Amakusa	AB748749
G. lobata		IR42	Iriomote	AB748750	AB748791	Yes
G. cf. lobata	With pali	SR14	Shirahama	AB748751	AB748792	Yes
G. cf. lobata	With pali	AO58	Amami	AB748752	AB748793	Yes
G. cf. lobata	Wide columella	MO67	Miyazaki	AB748687	AB748769	Yes
G. cf. lobata	Wide columella	IS20	Taketomi	AB748753		Yes
G. djiboutiensis		KS9	Kushimoto	AB748695
G. djiboutiensis		SR62	Shirahama	AB748696
G. djiboutiensis		OT30	Otsuki	AB748697	AB748775	Yes
G. djiboutiensis		AM30	Amakusa	AB748698
G. djiboutiensis		AM74	Amakusa	AB748699	AB748776	Yes	Yes
G. djiboutiensis		KK16	Kikai	AB748700
G. djiboutiensis		KK60	Kikai	AB748701
G. djiboutiensis		SS35	Sesoko	AB748702	AB748777	Yes
G. djiboutiensis		OU2	Oura Bay	AB748703
G. djiboutiensis		OU7	Oura Bay	AB748704
G. djiboutiensis		OU21	Oura Bay	AB748705	AB748778	Yes
G. djiboutiensis		OU28	Oura Bay	AB748706
G. djiboutiensis		OU33	Oura Bay	AB748707
G. djiboutiensis		IR13	Iriomote	AB748708-9
G. djiboutiensis		IR22	Iriomote	AB748710-1	AB748779	Yes
G. djiboutiensis		IR67	Iriomote	AB748712	AB748780
G. cf. djiboutiensis	Small columella	KS31	Kushimoto	AB748713
G. cf. djiboutiensis	Small columella	KS51	Kushimoto	AB748714
G. cf. djiboutiensis	No pali, small calice	SR23	Shirahama	AB748715-6
G. cf. djiboutiensis	Deep calice	SR24	Shirahama	AB748717
G. cf. djiboutiensis	Irregular shape of corallum	OT24	Otsuki	AB748688	AB748770	Yes
G. cf. djiboutiensis	Deep calice	OT29	Otsuki	AB748718-20	AB748781	Yes
G. cf. djiboutiensis	Deep calice	MO16	Miyazaki	AB748721
G. cf. djiboutiensis	Deep calice	MO23	Miyazaki	AB748689	AB748774	Yes
G. cf. djiboutiensis	Deep calice	MO40	Miyazaki	AB748722
G. cf. djiboutiensis	Deep calice	MO53	Miyazaki	AB748723	AB748782	Yes
G. cf. djiboutiensis	Deep calice	MO63	Miyazaki	AB748724-5
G. cf. djiboutiensis	Thin wall	AM26	Amakusa	AB748726-7
G. cf. djiboutiensis	Irregular shape of corallum	AM75	Amakusa	AB748728-9	AB748783	Yes	Yes
G. cf. djiboutiensis	Small, deep calice	AM89	Amakusa	AB748730	AB748784	Yes	Yes
G. cf. djiboutiensis	Thin wall	TN40	Tanegashima	AB748731-2
G. cf. djiboutiensis	No pali	TN41	Tanegashima	AB748690	AB748771	Yes
G. cf. djiboutiensis	No pali	TN55	Tanegashima	AB748733-4	AB748785
G. cf. djiboutiensis	No pali	TN95	Tanegashima	AB748735	AB748786	Yes
G. cf. djiboutiensis	No pali	TN113	Tanegashima	AB748736	AB748787	Yes
G. cf. djiboutiensis	Small columella	TN115	Tanegashima	AB748737-8
G. cf. djiboutiensis	Deep calice	KK4	Kikai	AB748691	AB748772
G. cf. djiboutiensis	No pali	KK11	Kikai	AB748692	AB748773	Yes
G. cf. djiboutiensis	No pali	KK22	Kikai	AB748693
G. cf. djiboutiensis	No pali	KK27	Kikai	AB748694
G. cf. djiboutiensis	Deep calice at top of colony	IS19	Taketomi	AB748739
G. cf. djiboutiensis	Deep calice at top of colony	IR3	Iriomote	AB748740
G. pendulus		OT14	Otsuki	AB748676-80	AB748764	Yes
G. pendulus		OT19	Otsuki	AB748681	AB748765	Yes
G. pendulus		OT27	Otsuki	AB748682
G. pendulus		OT31	Otsuki	AB748683	AB748766	Yes
G. pendulus		TN11	Tanegashima	AB748684	AB748767	Yes
G. pendulus		TN42	Tanegashima	AB748685

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